Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm23768-201ENSMUST00000104440 131 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm14173-201ENSMUST00000117690 278 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Gm8692-201ENSMUST00000118102 438 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm13438-201ENSMUST00000120100 573 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm11962-201ENSMUST00000145746 255 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.48□□□□□ -1.53
Lsm6P62313 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm37838-201ENSMUST00000194464 312 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Lsm6P62313 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Gm5321-201ENSMUST00000072050 447 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.48□□□□□ -1.53
Lsm6P62313 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm6P62313 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Lsm6P62313 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm6P62313 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm6P62313 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm6P62313 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm6P62313 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Mir711-201ENSMUST00000102188 82 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm26289-201ENSMUST00000104169 131 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm8312-201ENSMUST00000119380 618 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm13818-201ENSMUST00000119441 511 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm14489-201ENSMUST00000120868 901 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm15187-201ENSMUST00000122329 264 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm22642-201ENSMUST00000175352 252 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Mir5107-201ENSMUST00000175586 88 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm27005-201ENSMUST00000182783 921 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm18700-201ENSMUST00000185791 553 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm17934-201ENSMUST00000192818 422 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm37758-201ENSMUST00000194275 629 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm43354-201ENSMUST00000196862 346 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.47□□□□□ -1.53
Lsm6P62313 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.47□□□□□ -1.53
Lsm6P62313 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms