Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
Shmt1P50431 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm11318-201ENSMUST00000118640 961 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm13604-201ENSMUST00000119332 482 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm14900-201ENSMUST00000120304 733 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm14599-201ENSMUST00000120469 474 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm25117-201ENSMUST00000157194 144 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm26162-201ENSMUST00000157793 132 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm10177-201ENSMUST00000160052 444 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm29160-201ENSMUST00000190094 699 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm38201-201ENSMUST00000192143 387 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm38237-201ENSMUST00000193366 376 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm43136-201ENSMUST00000200403 636 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm5471-201ENSMUST00000072732 337 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Gm2531-201ENSMUST00000075609 512 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Olfr1160-201ENSMUST00000099839 960 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.86□□□□□ -1.31
Shmt1P50431 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm11498-201ENSMUST00000120660 949 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm25057-201ENSMUST00000157366 88 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm23777-201ENSMUST00000158994 259 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.85□□□□□ -1.31
Shmt1P50431 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm17075-201ENSMUST00000171924 670 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm10410-201ENSMUST00000180138 384 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm26898-201ENSMUST00000181678 384 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm37376-201ENSMUST00000192176 453 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm38330-201ENSMUST00000192743 959 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm43550-201ENSMUST00000200597 303 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.85□□□□□ -1.31
Shmt1P50431 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm2225-201ENSMUST00000209570 377 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.85□□□□□ -1.31
Shmt1P50431 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm5341-201ENSMUST00000058881 489 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Gm15732-201ENSMUST00000079794 480 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms