Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx3P48381 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx3P48381 Olfr687-201ENSMUST00000098154 938 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Rfx3P48381 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx3P48381 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx3P48381 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx3P48381 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx3P48381 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx3P48381 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx3P48381 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rfx3P48381 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rfx3P48381 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.62□□□□□ -1.51
Rfx3P48381 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.62□□□□□ -1.51
Rfx3P48381 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm15750-201ENSMUST00000120970 616 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm26167-201ENSMUST00000158423 253 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm26211-201ENSMUST00000158578 129 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm27601-201ENSMUST00000184794 127 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm38068-201ENSMUST00000192546 540 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.61□□□□□ -1.51
Rfx3P48381 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.61□□□□□ -1.51
Rfx3P48381 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.61□□□□□ -1.51
Rfx3P48381 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Rfx3P48381 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx3P48381 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx3P48381 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx3P48381 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm14382-201ENSMUST00000117374 437 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm11462-201ENSMUST00000117749 562 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm12115-201ENSMUST00000119969 447 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm24359-201ENSMUST00000158418 221 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm3242-201ENSMUST00000171273 485 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx3P48381 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm29784-201ENSMUST00000196217 406 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm17834-201ENSMUST00000204322 891 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms