Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC8.17□□□□□ -1.1
Rfx1P48377 Mir6972-201ENSMUST00000184774 64 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm29197-201ENSMUST00000185922 702 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm28117-201ENSMUST00000188472 371 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm6077-201ENSMUST00000196008 499 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 AC124542.1-201ENSMUST00000205588 908 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm18060-201ENSMUST00000207407 564 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm4057-201ENSMUST00000221407 368 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC8.17□□□□□ -1.1
Rfx1P48377 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rfx1P48377 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rfx1P48377 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rfx1P48377 Mir465-201ENSMUST00000093563 74 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Olfr687-201ENSMUST00000098154 938 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm14849-201ENSMUST00000122293 2846 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rfx1P48377 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.16□□□□□ -1.1
Rfx1P48377 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm17184-201ENSMUST00000111864 462 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm17170-201ENSMUST00000112785 316 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm8644-201ENSMUST00000118619 596 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm15843-201ENSMUST00000146593 529 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm25981-201ENSMUST00000157921 295 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.16□□□□□ -1.1
Rfx1P48377 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Mir6919-201ENSMUST00000185146 62 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm37270-201ENSMUST00000194277 330 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm36932-201ENSMUST00000195226 929 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm43493-201ENSMUST00000199837 202 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Rfx1P48377 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm44565-201ENSMUST00000208194 269 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm5649-201ENSMUST00000217918 951 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Gm18387-201ENSMUST00000220333 702 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm9289-201ENSMUST00000221269 606 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Rfx1P48377 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Rfx1P48377 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rfx1P48377 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rfx1P48377 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.16□□□□□ -1.1
Rfx1P48377 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rfx1P48377 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm28874-201ENSMUST00000190917 3134 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm37967-201ENSMUST00000195634 2665 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm15233-201ENSMUST00000118747 400 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm15484-201ENSMUST00000118871 828 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms