Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.53□□□□□ -1.52
P20040 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
P20040 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
P20040 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm13176-201ENSMUST00000117910 477 ntBASIC5.53□□□□□ -1.52
P20040 Gm14485-201ENSMUST00000119489 493 ntBASIC5.53□□□□□ -1.52
P20040 Gm12189-201ENSMUST00000119779 912 ntBASIC5.53□□□□□ -1.52
P20040 Gm12101-201ENSMUST00000121590 390 ntBASIC5.53□□□□□ -1.52
P20040 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.53□□□□□ -1.52
P20040 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.53□□□□□ -1.52
P20040 Gm16102-201ENSMUST00000160955 420 ntBASIC5.53□□□□□ -1.52
P20040 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Gm4152-201ENSMUST00000172675 259 ntBASIC5.53□□□□□ -1.52
P20040 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.53□□□□□ -1.52
P20040 Gm22690-201ENSMUST00000175054 110 ntBASIC5.53□□□□□ -1.52
P20040 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm37380-201ENSMUST00000193752 397 ntBASIC5.53□□□□□ -1.52
P20040 Gm43772-201ENSMUST00000202052 379 ntBASIC5.53□□□□□ -1.52
P20040 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.53□□□□□ -1.52
P20040 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.53□□□□□ -1.52
P20040 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.53□□□□□ -1.52
P20040 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.53□□□□□ -1.52
P20040 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.53□□□□□ -1.52
P20040 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.53□□□□□ -1.52
P20040 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.53□□□□□ -1.52
P20040 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.53□□□□□ -1.52
P20040 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
P20040 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.53□□□□□ -1.52
P20040 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.53□□□□□ -1.52
P20040 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.53□□□□□ -1.52
P20040 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
P20040 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.52□□□□□ -1.53
P20040 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
P20040 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.52□□□□□ -1.53
P20040 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
P20040 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm15048-201ENSMUST00000118201 954 ntBASIC5.52□□□□□ -1.53
P20040 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Gm14716-201ENSMUST00000120138 718 ntBASIC5.52□□□□□ -1.53
P20040 Gm15596-201ENSMUST00000121139 784 ntBASIC5.52□□□□□ -1.53
P20040 Gm15502-201ENSMUST00000121449 208 ntBASIC5.52□□□□□ -1.53
P20040 Gm2986-201ENSMUST00000121603 382 ntBASIC5.52□□□□□ -1.53
P20040 Gm14587-201ENSMUST00000121714 658 ntBASIC5.52□□□□□ -1.53
P20040 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.52□□□□□ -1.53
P20040 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Gm13669-201ENSMUST00000122366 457 ntBASIC5.52□□□□□ -1.53
P20040 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.52□□□□□ -1.53
P20040 Gm22223-201ENSMUST00000157360 125 ntBASIC5.52□□□□□ -1.53
P20040 Gm24359-201ENSMUST00000158418 221 ntBASIC5.52□□□□□ -1.53
P20040 Gm25904-201ENSMUST00000158491 143 ntBASIC5.52□□□□□ -1.53
P20040 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.52□□□□□ -1.53
P20040 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.52□□□□□ -1.53
P20040 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm17121-201ENSMUST00000170414 847 ntBASIC5.52□□□□□ -1.53
P20040 Gm18808-201ENSMUST00000173316 462 ntBASIC5.52□□□□□ -1.53
P20040 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
P20040 Gm17222-201ENSMUST00000180135 847 ntBASIC5.52□□□□□ -1.53
P20040 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.52□□□□□ -1.53
P20040 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.52□□□□□ -1.53
P20040 Gm21877-201ENSMUST00000185640 694 ntBASIC5.52□□□□□ -1.53
P20040 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm20926-201ENSMUST00000194457 696 ntBASIC5.52□□□□□ -1.53
P20040 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms