Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm28629-201ENSMUST00000187309 263 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm28151-201ENSMUST00000189404 951 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm18838-201ENSMUST00000204855 886 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm6070-201ENSMUST00000207275 419 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm44857-201ENSMUST00000208331 196 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm45523-201ENSMUST00000210712 799 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 AC122372.1-201ENSMUST00000215344 280 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm7753-201ENSMUST00000221007 867 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 AC154227.2-201ENSMUST00000228677 2101 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm4849-201ENSMUST00000188428 2246 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm37096-201ENSMUST00000192317 2058 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm3940-201ENSMUST00000105087 432 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm7785-201ENSMUST00000117121 892 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm14909-201ENSMUST00000117853 351 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm8688-201ENSMUST00000118240 969 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm13349-201ENSMUST00000118436 411 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm12455-201ENSMUST00000121242 416 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm6044-201ENSMUST00000121819 499 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm15079-201ENSMUST00000121943 216 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm24327-201ENSMUST00000175108 78 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm23141-201ENSMUST00000178682 94 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm4850-201ENSMUST00000185684 559 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm8458-201ENSMUST00000196658 819 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm44852-201ENSMUST00000207950 369 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm4270-201ENSMUST00000209666 406 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm6667-201ENSMUST00000217169 564 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm19181-201ENSMUST00000218891 940 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm5948-201ENSMUST00000219627 839 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms