Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Hmgb3O54879 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm8177-201ENSMUST00000181591 1336 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 CT030185.2-201ENSMUST00000222614 1310 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm44045-201ENSMUST00000204906 2520 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 AC134577.3-201ENSMUST00000226490 3000 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm15054-201ENSMUST00000117393 281 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm13311-201ENSMUST00000117863 379 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm15349-201ENSMUST00000121154 204 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm26182-201ENSMUST00000157688 116 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm25180-201ENSMUST00000157746 115 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm26037-201ENSMUST00000158150 311 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm9359-201ENSMUST00000163721 1221 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm17205-201ENSMUST00000168370 1207 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm27006-201ENSMUST00000182218 943 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC4.97□□□□□ -1.61
Hmgb3O54879 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm37770-201ENSMUST00000192855 772 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Ighv1-45-201ENSMUST00000193677 352 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm18428-201ENSMUST00000194986 791 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm2566-201ENSMUST00000201267 431 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm36378-201ENSMUST00000201709 388 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm17822-201ENSMUST00000204307 351 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm45279-201ENSMUST00000210315 391 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 AC122539.1-201ENSMUST00000219925 329 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Hmgb3O54879 CT009711.2-202ENSMUST00000224538 973 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 AC154755.1-201ENSMUST00000225244 537 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 CT030705.2-201ENSMUST00000225301 556 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Hmgb3O54879 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hmgb3O54879 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hmgb3O54879 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC4.97□□□□□ -1.61
Hmgb3O54879 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm45793-201ENSMUST00000207900 1342 ntBASIC4.97□□□□□ -1.61
Hmgb3O54879 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hmgb3O54879 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hmgb3O54879 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC4.96□□□□□ -1.61
Hmgb3O54879 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.61
Hmgb3O54879 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Hmgb3O54879 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Hmgb3O54879 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Hmgb3O54879 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms