Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm25345-201ENSMUST00000104505 133 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm22194-201ENSMUST00000116869 95 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm11481-201ENSMUST00000120069 255 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm6808-201ENSMUST00000162341 807 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm7713-201ENSMUST00000181201 1007 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm8929-201ENSMUST00000197781 1132 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 n-R5s204-201ENSMUST00000082972 119 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm19093-201ENSMUST00000210671 1454 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm34294-201ENSMUST00000191912 4263 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm42940-201ENSMUST00000200361 2362 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Gm44229-201ENSMUST00000203211 2487 ntBASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc180J3QNE4 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm22106-201ENSMUST00000122544 127 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm22235-201ENSMUST00000157085 110 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm3008-201ENSMUST00000160566 571 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm8930-201ENSMUST00000201693 768 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm36501-201ENSMUST00000221857 745 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 AC129537.1-201ENSMUST00000226596 1228 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm42630-201ENSMUST00000195908 3448 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm10062-201ENSMUST00000072180 1470 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm8826-201ENSMUST00000193161 948 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm45596-201ENSMUST00000209279 434 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 AC123832.2-201ENSMUST00000215151 129 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm24525-201ENSMUST00000082917 151 ntBASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc180J3QNE4 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm6382-201ENSMUST00000118873 942 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm14335-201ENSMUST00000119165 810 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm27679-201ENSMUST00000184612 84 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 AC164618.3-201ENSMUST00000224863 681 ntBASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc180J3QNE4 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms