Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.85□□□□□ -0.19
PdfS4R2K0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PdfS4R2K0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PdfS4R2K0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PdfS4R2K0 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.85□□□□□ -0.19
PdfS4R2K0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PdfS4R2K0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PdfS4R2K0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.84□□□□□ -0.19
PdfS4R2K0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PdfS4R2K0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.84□□□□□ -0.19
PdfS4R2K0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdfS4R2K0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PdfS4R2K0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PdfS4R2K0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
PdfS4R2K0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PdfS4R2K0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdfS4R2K0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdfS4R2K0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdfS4R2K0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.83□□□□□ -0.2
PdfS4R2K0 Spcs1-204ENSMUST00000226782 949 ntBASIC13.83□□□□□ -0.2
PdfS4R2K0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PdfS4R2K0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdfS4R2K0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PdfS4R2K0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PdfS4R2K0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PdfS4R2K0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PdfS4R2K0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.82□□□□□ -0.2
PdfS4R2K0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.82□□□□□ -0.2
PdfS4R2K0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.82□□□□□ -0.2
PdfS4R2K0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdfS4R2K0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PdfS4R2K0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PdfS4R2K0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.81□□□□□ -0.2
PdfS4R2K0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.81□□□□□ -0.2
PdfS4R2K0 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.81□□□□□ -0.2
PdfS4R2K0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.81□□□□□ -0.2
PdfS4R2K0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PdfS4R2K0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdfS4R2K0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms