Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn8aQ9WTU3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn8aQ9WTU3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn8aQ9WTU3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Scn8aQ9WTU3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn8aQ9WTU3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn8aQ9WTU3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn8aQ9WTU3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn8aQ9WTU3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Scn8aQ9WTU3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn8aQ9WTU3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn8aQ9WTU3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn8aQ9WTU3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn8aQ9WTU3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn8aQ9WTU3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Scn8aQ9WTU3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms