Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nubp1Q9R060 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.74■□□□□ 0.11
Nubp1Q9R060 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Gm7889-201ENSMUST00000185591 958 ntBASIC15.73■□□□□ 0.11
Nubp1Q9R060 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.73■□□□□ 0.11
Nubp1Q9R060 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.73■□□□□ 0.11
Nubp1Q9R060 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nubp1Q9R060 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Gm10013-201ENSMUST00000106074 672 ntBASIC15.72■□□□□ 0.11
Nubp1Q9R060 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.72■□□□□ 0.11
Nubp1Q9R060 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nubp1Q9R060 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.71■□□□□ 0.11
Nubp1Q9R060 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Gm23634-201ENSMUST00000175071 91 ntBASIC15.71■□□□□ 0.11
Nubp1Q9R060 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Gm18101-201ENSMUST00000215769 548 ntBASIC15.71■□□□□ 0.11
Nubp1Q9R060 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.71■□□□□ 0.11
Nubp1Q9R060 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nubp1Q9R060 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Nubp1Q9R060 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nubp1Q9R060 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 AA414768-201ENSMUST00000121924 1257 ntBASIC15.7■□□□□ 0.1
Nubp1Q9R060 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Gm33142-201ENSMUST00000193913 867 ntBASIC15.7■□□□□ 0.1
Nubp1Q9R060 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.7■□□□□ 0.1
Nubp1Q9R060 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nubp1Q9R060 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms