Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh5Q9QUM7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh5Q9QUM7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Gm6420-201ENSMUST00000193885 723 ntBASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh5Q9QUM7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Gm19087-201ENSMUST00000191430 946 ntBASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh5Q9QUM7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.35■□□□□ 0.53
Msh5Q9QUM7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Msh5Q9QUM7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.35■□□□□ 0.53
Msh5Q9QUM7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms