Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem3Q9JKE1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Gm43060-201ENSMUST00000200621 289 ntBASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem3Q9JKE1 Tgds-204ENSMUST00000228543 1594 ntBASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.6□□□□□ -0.07
Trem3Q9JKE1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem3Q9JKE1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.58□□□□□ -0.07
Trem3Q9JKE1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trem3Q9JKE1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trem3Q9JKE1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trem3Q9JKE1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms