Protein–RNA interactions for Protein: Q9JK54

Msgn1, Mesogenin-1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msgn1Q9JK54 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msgn1Q9JK54 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.7■□□□□ 0.74
Msgn1Q9JK54 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msgn1Q9JK54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Gm4974-201ENSMUST00000209974 875 ntBASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msgn1Q9JK54 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msgn1Q9JK54 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msgn1Q9JK54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msgn1Q9JK54 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Gm33142-201ENSMUST00000193913 867 ntBASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msgn1Q9JK54 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msgn1Q9JK54 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.64■□□□□ 0.73
Msgn1Q9JK54 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 BC021767-201ENSMUST00000126387 1716 ntBASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.63■□□□□ 0.73
Msgn1Q9JK54 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms