Protein–RNA interactions for Protein: Q9JJ89

Ccdc86, Coiled-coil domain-containing protein 86, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc86Q9JJ89 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccdc86Q9JJ89 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc86Q9JJ89 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc86Q9JJ89 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Ccdc86Q9JJ89 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc86Q9JJ89 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc86Q9JJ89 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Zfp783-201ENSMUST00000095946 670 ntBASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc86Q9JJ89 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc86Q9JJ89 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Gm12441-201ENSMUST00000121806 588 ntBASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Gm38285-201ENSMUST00000192928 922 ntBASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc86Q9JJ89 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Dio3-201ENSMUST00000097228 1449 ntBASIC18.4■□□□□ 0.54
Ccdc86Q9JJ89 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc86Q9JJ89 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Gm12896-201ENSMUST00000118430 226 ntBASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Gm11927-201ENSMUST00000118472 759 ntBASIC18.39■□□□□ 0.53
Ccdc86Q9JJ89 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms