Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc89Q9DA73 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc89Q9DA73 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc89Q9DA73 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc89Q9DA73 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc89Q9DA73 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Gm8495-201ENSMUST00000188740 694 ntBASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Gm6365-201ENSMUST00000054711 744 ntBASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc89Q9DA73 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc89Q9DA73 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc89Q9DA73 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc89Q9DA73 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms