Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tube1Q9D6T1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Tube1Q9D6T1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tube1Q9D6T1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tube1Q9D6T1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tube1Q9D6T1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tube1Q9D6T1 Gm44549-201ENSMUST00000208351 577 ntBASIC20.09■□□□□ 0.81
Tube1Q9D6T1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.09■□□□□ 0.81
Tube1Q9D6T1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.09■□□□□ 0.81
Tube1Q9D6T1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tube1Q9D6T1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tube1Q9D6T1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tube1Q9D6T1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tube1Q9D6T1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tube1Q9D6T1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tube1Q9D6T1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Tube1Q9D6T1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tube1Q9D6T1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tube1Q9D6T1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms