Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx29Q9D3S3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.91■□□□□ 0.78
Snx29Q9D3S3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx29Q9D3S3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Gm6659-201ENSMUST00000174752 547 ntBASIC19.9■□□□□ 0.78
Snx29Q9D3S3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Gm18959-201ENSMUST00000208954 655 ntBASIC19.9■□□□□ 0.78
Snx29Q9D3S3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx29Q9D3S3 Gm12085-201ENSMUST00000119263 940 ntBASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx29Q9D3S3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Gm38027-201ENSMUST00000192315 235 ntBASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx29Q9D3S3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 BC021767-201ENSMUST00000126387 1716 ntBASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Snx29Q9D3S3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx29Q9D3S3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.85■□□□□ 0.77
Snx29Q9D3S3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx29Q9D3S3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Gm45058-201ENSMUST00000205810 766 ntBASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Gm4974-201ENSMUST00000209974 875 ntBASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx29Q9D3S3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms