Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Gm11421-201ENSMUST00000122124 294 ntBASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim13Q9CYB0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim13Q9CYB0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim13Q9CYB0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim13Q9CYB0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Smad6-203ENSMUST00000179458 273 ntBASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Gm27801-201ENSMUST00000184174 223 ntBASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim13Q9CYB0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim13Q9CYB0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim13Q9CYB0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim13Q9CYB0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gm12821-201ENSMUST00000120022 600 ntBASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.66■□□□□ 0.26
Trim13Q9CYB0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms