Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr3Q99MB1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tlr3Q99MB1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Gm44549-201ENSMUST00000208351 577 ntBASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlr3Q99MB1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Gm13168-201ENSMUST00000121771 632 ntBASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlr3Q99MB1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Fst-202ENSMUST00000223640 2612 ntBASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tlr3Q99MB1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlr3Q99MB1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms