Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Mtag2-201ENSMUST00000058665 714 ntBASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Gm10812-201ENSMUST00000099864 546 ntBASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha11Q91Y19 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha11Q91Y19 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha11Q91Y19 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha11Q91Y19 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha11Q91Y19 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha11Q91Y19 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms