Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb1Q91Y08 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Gm44549-201ENSMUST00000208351 577 ntBASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb1Q91Y08 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb1Q91Y08 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb1Q91Y08 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb1Q91Y08 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.77■□□□□ 0.59
Pcdhb1Q91Y08 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb1Q91Y08 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Rab3c-203ENSMUST00000224180 967 ntBASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb1Q91Y08 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Gm2399-201ENSMUST00000104944 225 ntBASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb1Q91Y08 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms