Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb4Q91XX6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb4Q91XX6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.08■□□□□ 0.64
Pcdhgb4Q91XX6 Gm7291-201ENSMUST00000199147 382 ntBASIC19.08■□□□□ 0.64
Pcdhgb4Q91XX6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb4Q91XX6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb4Q91XX6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb4Q91XX6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb4Q91XX6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb4Q91XX6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb4Q91XX6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb4Q91XX6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms