Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.52■□□□□ 0.56
Lims2Q91XD2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Fst-202ENSMUST00000223640 2612 ntBASIC18.52■□□□□ 0.56
Lims2Q91XD2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.52■□□□□ 0.56
Lims2Q91XD2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.52■□□□□ 0.56
Lims2Q91XD2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.52■□□□□ 0.56
Lims2Q91XD2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lims2Q91XD2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lims2Q91XD2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lims2Q91XD2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.51■□□□□ 0.55
Lims2Q91XD2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Lims2Q91XD2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lims2Q91XD2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.5■□□□□ 0.55
Lims2Q91XD2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Lims2Q91XD2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.5■□□□□ 0.55
Lims2Q91XD2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lims2Q91XD2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.49■□□□□ 0.55
Lims2Q91XD2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lims2Q91XD2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lims2Q91XD2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.46■□□□□ 0.55
Lims2Q91XD2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lims2Q91XD2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lims2Q91XD2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lims2Q91XD2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms