Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Tram1Q91V04 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tram1Q91V04 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tram1Q91V04 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tram1Q91V04 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Tram1Q91V04 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.55■□□□□ 0.08
Tram1Q91V04 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.55■□□□□ 0.08
Tram1Q91V04 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.55■□□□□ 0.08
Tram1Q91V04 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tram1Q91V04 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Tram1Q91V04 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tram1Q91V04 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.54■□□□□ 0.08
Tram1Q91V04 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.54■□□□□ 0.08
Tram1Q91V04 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tram1Q91V04 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tram1Q91V04 Tgds-204ENSMUST00000228543 1594 ntBASIC15.53■□□□□ 0.08
Tram1Q91V04 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tram1Q91V04 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.53■□□□□ 0.08
Tram1Q91V04 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.53■□□□□ 0.08
Tram1Q91V04 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Tram1Q91V04 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.53■□□□□ 0.08
Tram1Q91V04 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Tram1Q91V04 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tram1Q91V04 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tram1Q91V04 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tram1Q91V04 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tram1Q91V04 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.52■□□□□ 0.08
Tram1Q91V04 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tram1Q91V04 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Tram1Q91V04 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.52■□□□□ 0.08
Tram1Q91V04 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tram1Q91V04 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.52■□□□□ 0.08
Tram1Q91V04 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tram1Q91V04 Spcs1-204ENSMUST00000226782 949 ntBASIC15.52■□□□□ 0.08
Tram1Q91V04 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tram1Q91V04 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tram1Q91V04 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tram1Q91V04 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tram1Q91V04 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tram1Q91V04 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Tram1Q91V04 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.52■□□□□ 0.07
Tram1Q91V04 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tram1Q91V04 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.52■□□□□ 0.07
Tram1Q91V04 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tram1Q91V04 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.51■□□□□ 0.07
Tram1Q91V04 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.51■□□□□ 0.07
Tram1Q91V04 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.51■□□□□ 0.07
Tram1Q91V04 Golgb1-201ENSMUST00000023534 498 ntBASIC15.51■□□□□ 0.07
Tram1Q91V04 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Tram1Q91V04 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms