Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Gm7638-201ENSMUST00000121348 967 ntBASIC21.8■■□□□ 1.08
StrcQ8VIM6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.8■■□□□ 1.08
StrcQ8VIM6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.79■■□□□ 1.08
StrcQ8VIM6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.79■■□□□ 1.08
StrcQ8VIM6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
StrcQ8VIM6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
StrcQ8VIM6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.78■■□□□ 1.08
StrcQ8VIM6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.78■■□□□ 1.08
StrcQ8VIM6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.78■■□□□ 1.08
StrcQ8VIM6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
StrcQ8VIM6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
StrcQ8VIM6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
StrcQ8VIM6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Gm11950-201ENSMUST00000121615 838 ntBASIC21.77■■□□□ 1.08
StrcQ8VIM6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
StrcQ8VIM6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Gm13474-201ENSMUST00000122466 815 ntBASIC21.76■■□□□ 1.07
StrcQ8VIM6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.76■■□□□ 1.07
StrcQ8VIM6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
StrcQ8VIM6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.75■■□□□ 1.07
StrcQ8VIM6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Gm18958-201ENSMUST00000174258 762 ntBASIC21.75■■□□□ 1.07
StrcQ8VIM6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
StrcQ8VIM6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
StrcQ8VIM6 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.74■■□□□ 1.07
StrcQ8VIM6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
StrcQ8VIM6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
StrcQ8VIM6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm24841-201ENSMUST00000158676 357 ntBASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm9731-201ENSMUST00000209480 747 ntBASIC21.73■■□□□ 1.07
StrcQ8VIM6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm27389-201ENSMUST00000183622 195 ntBASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.73■■□□□ 1.07
StrcQ8VIM6 Gm34391-201ENSMUST00000203706 907 ntBASIC21.73■■□□□ 1.07
StrcQ8VIM6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
StrcQ8VIM6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.72■■□□□ 1.07
StrcQ8VIM6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
StrcQ8VIM6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.72■■□□□ 1.07
StrcQ8VIM6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
StrcQ8VIM6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms