Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim60Q8VI40 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim60Q8VI40 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.71■□□□□ 0.59
Trim60Q8VI40 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim60Q8VI40 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Gm8969-201ENSMUST00000199694 526 ntBASIC18.7■□□□□ 0.58
Trim60Q8VI40 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim60Q8VI40 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim60Q8VI40 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim60Q8VI40 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Gm22325-201ENSMUST00000158904 308 ntBASIC18.69■□□□□ 0.58
Trim60Q8VI40 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim60Q8VI40 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.68■□□□□ 0.58
Trim60Q8VI40 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.68■□□□□ 0.58
Trim60Q8VI40 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim60Q8VI40 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.67■□□□□ 0.58
Trim60Q8VI40 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.67■□□□□ 0.58
Trim60Q8VI40 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim60Q8VI40 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Gm42778-201ENSMUST00000199644 553 ntBASIC18.66■□□□□ 0.58
Trim60Q8VI40 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim60Q8VI40 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms