Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r28Q8R2C9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Gm37856-201ENSMUST00000191634 999 ntBASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vmn1r28Q8R2C9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Trmt13-210ENSMUST00000198454 880 ntBASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r28Q8R2C9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Dio3-201ENSMUST00000097228 1449 ntBASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vmn1r28Q8R2C9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vmn1r28Q8R2C9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vmn1r28Q8R2C9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vmn1r28Q8R2C9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Flg-201ENSMUST00000050758 1488 ntBASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vmn1r28Q8R2C9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vmn1r28Q8R2C9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vmn1r28Q8R2C9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Gm11249-201ENSMUST00000117071 859 ntBASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.55■□□□□ 0.24
Vmn1r28Q8R2C9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms