Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chmp7Q8R1T1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chmp7Q8R1T1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Chmp7Q8R1T1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Chmp7Q8R1T1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Chmp7Q8R1T1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Chmp7Q8R1T1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chmp7Q8R1T1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.12■■□□□ 1.29
Chmp7Q8R1T1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chmp7Q8R1T1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chmp7Q8R1T1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 AC159205.6-201ENSMUST00000224935 887 ntBASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.09■■□□□ 1.29
Chmp7Q8R1T1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Chmp7Q8R1T1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Chmp7Q8R1T1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Chmp7Q8R1T1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Chmp7Q8R1T1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Chmp7Q8R1T1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms