Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
Clrn1Q8K445 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Clrn1Q8K445 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.05■□□□□ 0.32
Clrn1Q8K445 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn1Q8K445 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.04■□□□□ 0.32
Clrn1Q8K445 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn1Q8K445 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.03■□□□□ 0.32
Clrn1Q8K445 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn1Q8K445 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn1Q8K445 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn1Q8K445 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clrn1Q8K445 Gm26524-201ENSMUST00000192339 390 ntBASIC17.02■□□□□ 0.32
Clrn1Q8K445 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn1Q8K445 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clrn1Q8K445 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn1Q8K445 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn1Q8K445 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn1Q8K445 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.01■□□□□ 0.31
Clrn1Q8K445 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.01■□□□□ 0.31
Clrn1Q8K445 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.01■□□□□ 0.31
Clrn1Q8K445 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.01■□□□□ 0.31
Clrn1Q8K445 Rab3c-203ENSMUST00000224180 967 ntBASIC17.01■□□□□ 0.31
Clrn1Q8K445 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clrn1Q8K445 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Clrn1Q8K445 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17■□□□□ 0.31
Clrn1Q8K445 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms