Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.72■□□□□ 0.43
Cnot6Q8K3P5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Reep4-203ENSMUST00000226563 1444 ntBASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cnot6Q8K3P5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cnot6Q8K3P5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cnot6Q8K3P5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cnot6Q8K3P5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cnot6Q8K3P5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Gm18284-201ENSMUST00000172604 624 ntBASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cnot6Q8K3P5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms