Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rftn2Q8CHX7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rftn2Q8CHX7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Gm11643-201ENSMUST00000119578 864 ntBASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.19■□□□□ 0.66
Rftn2Q8CHX7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Rftn2Q8CHX7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rftn2Q8CHX7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Gm37055-201ENSMUST00000191866 133 ntBASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rftn2Q8CHX7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm10418-201ENSMUST00000100943 576 ntBASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.15■□□□□ 0.66
Rftn2Q8CHX7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rftn2Q8CHX7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Rftn2Q8CHX7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms