Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.61■■□□□ 1.37
Rsph6aQ8CDR2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rsph6aQ8CDR2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rsph6aQ8CDR2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.61■■□□□ 1.37
Rsph6aQ8CDR2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rsph6aQ8CDR2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Gm13836-201ENSMUST00000121159 501 ntBASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Tgds-204ENSMUST00000228543 1594 ntBASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rsph6aQ8CDR2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Golph3-205ENSMUST00000228671 2842 ntBASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rsph6aQ8CDR2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rsph6aQ8CDR2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Odf3b-204ENSMUST00000227834 930 ntBASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rsph6aQ8CDR2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Gm43799-201ENSMUST00000201845 579 ntBASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Gm3375-201ENSMUST00000203929 796 ntBASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rsph6aQ8CDR2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rsph6aQ8CDR2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph6aQ8CDR2 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.54■■□□□ 1.36
Rsph6aQ8CDR2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph6aQ8CDR2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Rsph6aQ8CDR2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rsph6aQ8CDR2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms