Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lrif1Q8CDD9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.84■□□□□ 0.45
Lrif1Q8CDD9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrif1Q8CDD9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lrif1Q8CDD9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrif1Q8CDD9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Lrif1Q8CDD9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrif1Q8CDD9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrif1Q8CDD9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrif1Q8CDD9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lrif1Q8CDD9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.79■□□□□ 0.44
Lrif1Q8CDD9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms