Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
E4f1Q8CCE9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
E4f1Q8CCE9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.27■■□□□ 1
E4f1Q8CCE9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
E4f1Q8CCE9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
E4f1Q8CCE9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
E4f1Q8CCE9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
E4f1Q8CCE9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
E4f1Q8CCE9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
E4f1Q8CCE9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
E4f1Q8CCE9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Fst-202ENSMUST00000223640 2612 ntBASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.23■□□□□ 0.99
E4f1Q8CCE9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.22■□□□□ 0.99
E4f1Q8CCE9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm7977-201ENSMUST00000193787 748 ntBASIC21.21■□□□□ 0.99
E4f1Q8CCE9 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
E4f1Q8CCE9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
E4f1Q8CCE9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms