Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.22■□□□□ 0.99
Usp44Q8C2S0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp44Q8C2S0 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp44Q8C2S0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Gm27275-201ENSMUST00000184318 272 ntBASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Usp44Q8C2S0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Gm37856-201ENSMUST00000191634 999 ntBASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp44Q8C2S0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Usp44Q8C2S0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp44Q8C2S0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp44Q8C2S0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp44Q8C2S0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.14■□□□□ 0.97
Usp44Q8C2S0 Mir2861-201ENSMUST00000175539 82 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms