Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trerf1Q8BXJ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trerf1Q8BXJ2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Mir5133-201ENSMUST00000174955 77 ntBASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.94■□□□□ 0.62
Trerf1Q8BXJ2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trerf1Q8BXJ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms