Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cpsf7Q8BTV2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.07■□□□□ 0.48
Cpsf7Q8BTV2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf7Q8BTV2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf7Q8BTV2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cpsf7Q8BTV2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms