Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcal1Q8BJL0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Smarcal1Q8BJL0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcal1Q8BJL0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcal1Q8BJL0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcal1Q8BJL0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcal1Q8BJL0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Gm27463-201ENSMUST00000183569 57 ntBASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcal1Q8BJL0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smarcal1Q8BJL0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms