Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Mtag2-201ENSMUST00000058665 714 ntBASIC17.41■□□□□ 0.38
Trim23Q8BGX0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Gm22240-201ENSMUST00000175225 82 ntBASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim23Q8BGX0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim23Q8BGX0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Trim23Q8BGX0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.38■□□□□ 0.37
Trim23Q8BGX0 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Gm10138-203ENSMUST00000206952 366 ntBASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim23Q8BGX0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim23Q8BGX0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.36■□□□□ 0.37
Trim23Q8BGX0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim23Q8BGX0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms