Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Gm5587-201ENSMUST00000206270 674 ntBASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trnp1Q80ZI1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Trnp1Q80ZI1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Gm28033-201ENSMUST00000184224 96 ntBASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Gm21559-201ENSMUST00000220638 855 ntBASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Gm8587-201ENSMUST00000076538 843 ntBASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trnp1Q80ZI1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trnp1Q80ZI1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Trnp1Q80ZI1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trnp1Q80ZI1 Gm9013-201ENSMUST00000132939 882 ntBASIC20.42■□□□□ 0.86
Trnp1Q80ZI1 Gm27389-201ENSMUST00000183622 195 ntBASIC20.42■□□□□ 0.86
Trnp1Q80ZI1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms