Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp38Q80UU2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp38Q80UU2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Gm12441-201ENSMUST00000121806 588 ntBASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp38Q80UU2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Rpp38Q80UU2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp38Q80UU2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp38Q80UU2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Rpp38Q80UU2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rpp38Q80UU2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rpp38Q80UU2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp38Q80UU2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18■□□□□ 0.47
Rpp38Q80UU2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 Gm12896-201ENSMUST00000118430 226 ntBASIC18■□□□□ 0.47
Rpp38Q80UU2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18■□□□□ 0.47
Rpp38Q80UU2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18■□□□□ 0.47
Rpp38Q80UU2 Gm20049-201ENSMUST00000219950 730 ntBASIC18■□□□□ 0.47
Rpp38Q80UU2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms