Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh8Q7TSK3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Gm22325-201ENSMUST00000158904 308 ntBASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh8Q7TSK3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Gm10698-201ENSMUST00000182663 604 ntBASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh8Q7TSK3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh8Q7TSK3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh8Q7TSK3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.77■□□□□ 0.44
Pcdh8Q7TSK3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh8Q7TSK3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh8Q7TSK3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh8Q7TSK3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh8Q7TSK3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdh8Q7TSK3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh8Q7TSK3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms