Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Gm18101-201ENSMUST00000215769 548 ntBASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx55Q6ZPL9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx55Q6ZPL9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx55Q6ZPL9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx55Q6ZPL9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Gm22697-201ENSMUST00000175194 63 ntBASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Ank2-226ENSMUST00000189368 339 ntBASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.64■□□□□ 0.89
Ddx55Q6ZPL9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx55Q6ZPL9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Gm9103-201ENSMUST00000119371 405 ntBASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ddx55Q6ZPL9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Gm4974-201ENSMUST00000209974 875 ntBASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.61■□□□□ 0.89
Ddx55Q6ZPL9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx55Q6ZPL9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms