Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn10aQ6QIY3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scn10aQ6QIY3 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.64■□□□□ 0.9
Scn10aQ6QIY3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn10aQ6QIY3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Gm7638-201ENSMUST00000121348 967 ntBASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn10aQ6QIY3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Scn10aQ6QIY3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn10aQ6QIY3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Gm24841-201ENSMUST00000158676 357 ntBASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Gm13474-201ENSMUST00000122466 815 ntBASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Gm29518-201ENSMUST00000190858 372 ntBASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn10aQ6QIY3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm27704-201ENSMUST00000185094 107 ntBASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm17807-201ENSMUST00000186869 298 ntBASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn10aQ6QIY3 Gm10418-201ENSMUST00000100943 576 ntBASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn10aQ6QIY3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Gm21559-201ENSMUST00000220638 855 ntBASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Gm8587-201ENSMUST00000076538 843 ntBASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.58■□□□□ 0.89
Scn10aQ6QIY3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn10aQ6QIY3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn10aQ6QIY3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Gm17808-201ENSMUST00000200859 894 ntBASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn10aQ6QIY3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms