Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf220Q6PDX6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf220Q6PDX6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf220Q6PDX6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf220Q6PDX6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf220Q6PDX6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf220Q6PDX6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf220Q6PDX6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms