Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd3Q6P9Z1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd3Q6P9Z1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcd3Q6P9Z1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd3Q6P9Z1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd3Q6P9Z1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd3Q6P9Z1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Smarcd3Q6P9Z1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd3Q6P9Z1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms