Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.27■□□□□ 0.52
Casc4Q6P2L7 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Casc4Q6P2L7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Casc4Q6P2L7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Casc4Q6P2L7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.26■□□□□ 0.51
Casc4Q6P2L7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Casc4Q6P2L7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gm12441-201ENSMUST00000121806 588 ntBASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gm22325-201ENSMUST00000158904 308 ntBASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.25■□□□□ 0.51
Casc4Q6P2L7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Casc4Q6P2L7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Casc4Q6P2L7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.23■□□□□ 0.51
Casc4Q6P2L7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Casc4Q6P2L7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Casc4Q6P2L7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Casc4Q6P2L7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms