Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube1Q6NZL8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube1Q6NZL8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scube1Q6NZL8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.35■□□□□ 0.37
Scube1Q6NZL8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.35■□□□□ 0.37
Scube1Q6NZL8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scube1Q6NZL8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube1Q6NZL8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube1Q6NZL8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube1Q6NZL8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms