Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.96■□□□□ 0.79
Krt39Q6IFX4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.96■□□□□ 0.79
Krt39Q6IFX4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.95■□□□□ 0.78
Krt39Q6IFX4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Gm13234-201ENSMUST00000120010 747 ntBASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.94■□□□□ 0.78
Krt39Q6IFX4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt39Q6IFX4 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt39Q6IFX4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Krt39Q6IFX4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt39Q6IFX4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms